Papers

When using the results of this server in a scientific publication, please cite the following papers:

  1. Kotelnikov, Ashizawa, Popov, Khan, Ignatov, Li, Hassan, Coutsias, Poda, Padhorny, Tropsha, Vajda, Kozakov "Accurate ligand–protein docking in CASP15 using the ClusPro LigTBM server,” Proteins 9112, 1822–1828 (2023) doi.org/10.1002/prot.26587 (accepted pdf)
  2. Kotelnikov, Alekseenko, Liu, Ignatov, Padhorny, Brini, Lukin, Coutsias, Dill, Kozakov "Sampling and refinement protocols for template-based macrocycle docking: 2018 D3R Grand Challenge 4,” Journal of Computer-Aided Molecular Design 34, 179–189 (2020) doi:10.1007/s10822-019-00257-1 (accepted pdf)
  3. Alekseenko, Kotelnikov, Ignatov, Egbert, Kholodov, Vajda, Kozakov "ClusPro LigTBM: Automated Template-Based Small Molecule Docking,” Journal of Molecular Biology (2019) doi:10.1016/j.jmb.2019.12.011 (accepted pdf)


LigTBM should only be used for noncommercial purposes.
ABC Group (Stony Brook University) and Vajda Lab (Boston University).